BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H08SP1|AL429820
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig751 1571 0.0
>3x_Contig751
Length = 2335
Score = 1571 bits (792), Expect = 0.0
Identities = 799/800 (99%), Gaps = 1/800 (0%)
Strand = Plus / Minus
Query: 1 gatcctatattttgatcccctatctcttagaaggtcgcctcgcactagtatcacacgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gatcctatattttgatcccctatctcttagaaggtcgcctcgcactagtatcacacgacc 758
Query: 61 gtctgtgaaacc-actgcaatacatgatgcatccaaattgcaagaaactgtggatactgg 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gtctgtgaaacccactgcaatacatgatgcatccaaattgcaagaaactgtggatactgg 698
Query: 120 atatgcattggaaccatttctaacctccgctagcgcatgatacttactttcatctttcgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 atatgcattggaaccatttctaacctccgctagcgcatgatacttactttcatctttcgg 638
Query: 180 cattttctctaaatcccataatttgatcaatacaggcttcccaagacattcaccaacact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cattttctctaaatcccataatttgatcaatacaggcttcccaagacattcaccaacact 578
Query: 240 tactattagggtatctgacactctttcgagatatgtcaattgatattcggacgtatatgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tactattagggtatctgacactctttcgagatatgtcaattgatattcggacgtatatgc 518
Query: 300 ctcaaactcaaattgtaatgtcatatcatgaagatctactaccttcaccacacttgcctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctcaaactcaaattgtaatgtcatatcatgaagatctactaccttcaccacacttgcctg 458
Query: 360 cactgcaattgctaaatacgtttcgttgagtgacgcaacagctgttagcgtgggatcaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cactgcaattgctaaatacgtttcgttgagtgacgcaacagctgttagcgtgggatcaga 398
Query: 420 gtaaagcggttgatcgctctcggtaaatggatccctaataggaatgttttcatataactg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtaaagcggttgatcgctctcggtaaatggatccctaataggaatgttttcatataactg 338
Query: 480 gaactgtctccatgtgtttaatgacatctttacttctcaattgaaaaccagtgccacgga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaactgtctccatgtgtttaatgacatctttacttctcaattgaaaaccagtgccacgga 278
Query: 540 ctgtatgtaattccgtaaattgctgaactatatcttacttgtggcgctgctgggattgtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctgtatgtaattccgtaaattgctgaactatatcttacttgtggcgctgctgggattgtg 218
Query: 600 gcaggttcttttctcagttatgtttcatttgtttaaataaacgctttgagtttaggctac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gcaggttcttttctcagttatgtttcatttgtttaaataaacgctttgagtttaggctac 158
Query: 660 atacaggtttattatctgatactaagtataatatatccatatcacgtgattcattactga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atacaggtttattatctgatactaagtataatatatccatatcacgtgattcattactga 98
Query: 720 agtaacaatacttctatactgaaaacggcttatagtaccgtattcagccaaggctcctgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 agtaacaatacttctatactgaaaacggcttatagtaccgtattcagccaaggctcctgt 38
Query: 780 agtagccctagactgctagg 799
||||||||||||||||||||
Sbjct: 37 agtagccctagactgctagg 18
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5432
Number of Sequences: 1807
Number of extensions: 5432
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)